myDGR
myDGR provides annotation of diversity-generating retroelements (DGR) systems, including reverse transcriptase (RT), target gene,
template repeat (TR), and variable repeat (VR, which is part of the target gene). Additional features including GC-rich inverted repeats (forming hairpin structure) and accessory gene will also be reported if applicable.
See a quick example: DGR predicted in Bordetella-phage-BPP-1, and more examples in the Demo Page
Use myDGR:
- Submit sequences to the server for prediction: Prediction
- Look up pre-calculated DGR systems: Collection or Genome
- Retrieve existing jobs: MyJob
- Check out The Help page for more explanations.
- For more information about RTs associated with DGR systems, checkout myRT
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